STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17168.1FMN-dependent dehydrogenase family protein (TIM barrel family protein). (385 aa)    
Predicted Functional Partners:
lldP
LldP; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
 0.848
porA2
PorA2; Pyruvate:ferredoxin oxidoreductase, subunit PorA2.
     
 0.743
porB3
PorB3; Pyruvate:ferredoxin oxidoreductase, subunit PorB3.
     
 0.715
ACN13243.1
Putative D-lactate dehydrogenase (FAD / iron-sulfur cluster-binding domain protein).
  
 0.592
ACN16616.1
FAD-binding oxidoreductase (iron-sulfur cluster-binding domain protein).
  
 0.592
ACN13932.1
Aminotransferase, class V (putative purine catabolism protein PucG).
  
 0.570
ACN17169.1
Predicted iron-sulfur cluster assembly protein (NifU like protein).
  
    0.563
ispH
IspH; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
   
 0.521
ACN16274.1
Predicted polyketide synthase.
  
 
 0.521
iscS2
IscS2; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
     
 0.507
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.