STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livF5LivF5; High-affinity ABC-type branched-chain amino acid transport systems, ATPase component LivF. (248 aa)    
Predicted Functional Partners:
ACN17730.1
ABC-type branched-chain amino acid transport-system, ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.987
livM5
LivM5; High-affinity branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
  
 0.985
livM1
LivM1; High-affinity branched-chain amino acid transporter, permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
  
 0.984
livM2
LivM2; High-affinity branched-chain amino acid ABC-type transporter, permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
  
 0.981
livM3
LivM3; ABC-type branched chain amino acid transporter, permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
  
 0.954
livM4
LivM4; ABC-type high affinity branched-chain amino acid transporter, permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
  
 0.913
ACN16454.1
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
  
0.877
ACN17731.1
ABC-type branched-chain amino acid transport-system, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.839
livH1
LivH1; High-affinity branched-chain amino acid transporter, permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
  
 0.838
ACN16455.1
ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.837
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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