STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
comAComA; Transport/processing ATP-binding protein ComA. (849 aa)    
Predicted Functional Partners:
ACN17216.1
Cyclic nucleotide-binding domain (cNMP-BD) protein.
 
 
 0.858
ACN17207.1
Peptidase M28B family protein.
 
 
 0.845
ACN17228.1
Glucosyl transferase family protein.
 
 
 0.802
ACN17227.1
Glycosyl transferase family protein.
 
 
 0.801
ACN17210.1
Conserved hypothetical protein.
 
     0.782
ACN17224.1
Hypothetical protein.
 
     0.780
ACN17225.1
Putative glycosyl transferase family protein.
 
     0.780
ACN17177.1
Cyclic nucleotide-binding domain (cNMP-BD) family protein.
 
 
 0.773
ACN16274.1
Predicted polyketide synthase.
  
 0.745
ACN14471.1
Conserved hypothetical protein.
  
     0.691
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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