STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17228.1Glucosyl transferase family protein. (420 aa)    
Predicted Functional Partners:
ACN17225.1
Putative glycosyl transferase family protein.
 
     0.955
ACN17224.1
Hypothetical protein.
 
  
 0.952
ACN17210.1
Conserved hypothetical protein.
     0.896
gpmB
GpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase GpmB (Phosphoglyceromutase).
 
  
 0.881
ACN17227.1
Glycosyl transferase family protein.
 
    
0.866
comA
ComA; Transport/processing ATP-binding protein ComA.
 
 
 0.802
ACN17223.1
Hypothetical protein.
       0.777
ACN17176.1
ATPase family protein.
  
     0.774
ACN17207.1
Peptidase M28B family protein.
 
   
 0.773
ACN17177.1
Cyclic nucleotide-binding domain (cNMP-BD) family protein.
  
   
 0.651
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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