STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17272.1NADH/FAD-dependent oxidoreductase. (446 aa)    
Predicted Functional Partners:
ACN16422.1
Predicted assimilatory-type nitrite/sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 0.916
ACN14152.1
Hypothetical protein.
   
 
 0.835
ACN15506.1
Iron-sulfur cluster-binding protein (Rieskeprotein, 2Fe-2S protein).
  
 
 0.773
soxB1
SoxB1; Sarcosine oxidase, subunit beta.
  
 
 0.747
soxB2
SoxB2; Sarcosine oxidase, subunit beta SoxB.
  
 
 0.747
ACN16906.1
FAD dependent oxidoreductase.
  
 
 0.747
pspC
PspC; Phage shock protein PspC.
       0.712
ACN17274.1
Putative phage shock protein PspB.
       0.709
ACN17564.1
Putative dissimilatory sulfite reductase.
      0.633
rpmJ
RpmJ; 50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.583
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.