STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pspCPspC; Phage shock protein PspC. (147 aa)    
Predicted Functional Partners:
pspA2
PspA2; Phage shock protein PspA2.
 
 
 0.993
ACN14859.1
PspA; Phage shock protein PspA (IM30).
  
 
 0.934
pspA1
PspA1; Phage shock protein PspA1.
  
 
 0.934
ACN17882.1
Putative membrane protein.
  
  
 0.882
ACN17411.1
Putative two-component system sensor protein.
  
 
 0.876
ACN17381.1
Sensory box histidine kinase/response regulator.
   
 
 0.867
barA
BarA; Signal transduction histidine kinase BarA.
   
 
 0.867
ACN16951.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA; Cold-shock inducible two-component sensory box histidine kinase /regulatory protein (Ntr family protein).
  
 
 0.849
ACN14613.1
Two component protein (response regulator/sensory box histidine kinase).
  
 
 0.839
ACN15839.1
Putative signal-transducing kinase with PAS/PAC domain.
  
 
 0.839
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.