Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ACN15448.1 | tatA | HRM2_23530 | HRM2_06850 | Putative rhomboid-family protein (ventrhoid transmembrane protein). | TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.792 |
| ACN15448.1 | tatB | HRM2_23530 | HRM2_42340 | Putative rhomboid-family protein (ventrhoid transmembrane protein). | TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.504 |
| ACN15935.1 | tatA | HRM2_28470 | HRM2_06850 | Conserved hypothetical protein. | TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.504 |
| ACN15935.1 | tatB | HRM2_28470 | HRM2_42340 | Conserved hypothetical protein. | TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.504 |
| ACN15945.1 | tatA | HRM2_28570 | HRM2_06850 | Hypothetical protein. | TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.792 |
| ACN15945.1 | tatB | HRM2_28570 | HRM2_42340 | Hypothetical protein. | TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.504 |
| ACN16827.1 | tatA | HRM2_37690 | HRM2_06850 | Putative ankyrin membrane protein. | TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.504 |
| ACN16827.1 | tatB | HRM2_37690 | HRM2_42340 | Putative ankyrin membrane protein. | TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.504 |
| ACN17292.1 | recQ2 | HRM2_42360 | HRM2_42330 | Cytochrome c, class III family protein. | RecQ2; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. | 0.479 |
| ACN17292.1 | tatB | HRM2_42360 | HRM2_42340 | Cytochrome c, class III family protein. | TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.491 |
| ACN17292.1 | tatC | HRM2_42360 | HRM2_42350 | Cytochrome c, class III family protein. | TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.507 |
| guaA1 | tatA | HRM2_18870 | HRM2_06850 | GuaA1; Catalyzes the synthesis of GMP from XMP. | TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.936 |
| guaA1 | tatB | HRM2_18870 | HRM2_42340 | GuaA1; Catalyzes the synthesis of GMP from XMP. | TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.936 |
| guaA2 | tatA | HRM2_34580 | HRM2_06850 | GuaA2; Glutamine-hydrolyzing GMP synthase GuaA (glutamine amidotransferase) (GMP synthetase). | TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.550 |
| guaA2 | tatB | HRM2_34580 | HRM2_42340 | GuaA2; Glutamine-hydrolyzing GMP synthase GuaA (glutamine amidotransferase) (GMP synthetase). | TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.550 |
| recQ2 | ACN17292.1 | HRM2_42330 | HRM2_42360 | RecQ2; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. | Cytochrome c, class III family protein. | 0.479 |
| recQ2 | tatB | HRM2_42330 | HRM2_42340 | RecQ2; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. | TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.585 |
| recQ2 | tatC | HRM2_42330 | HRM2_42350 | RecQ2; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. | TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.584 |
| tatA | ACN15448.1 | HRM2_06850 | HRM2_23530 | TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Putative rhomboid-family protein (ventrhoid transmembrane protein). | 0.792 |
| tatA | ACN15935.1 | HRM2_06850 | HRM2_28470 | TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | Conserved hypothetical protein. | 0.504 |
page 1 of 2