STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
minD2MinD2; Two domain fusion protein MinD (iron-sulfur binding 4Fe-4S ferredoxin; Cobyrinic acid a,c-diamide synthase). (286 aa)    
Predicted Functional Partners:
ACN17302.1
Hypothetical protein.
 
  
 0.941
ACN17303.1
Hypothetical protein.
 
  
 0.910
ACN17301.1
Ferredoxin (iron-sulfur cluster-binding protein).
 
  
0.881
ACN14660.1
Hypothetical protein.
 
  
 0.818
ACN17745.1
Conserved hypothetical protein.
 
  
 0.818
ACN17416.1
Putative Metal-dependent hydrolase.
 
     0.754
ACN17425.1
Putative metal-dependent hydrolase.
 
     0.727
ACN15979.1
Putative metal dependent hydrolase.
 
     0.723
ACN16200.1
Conserved hypothetical protein; Belongs to the UPF0251 family.
 
     0.704
ACN16310.1
Conserved hypothetical protein.
 
     0.691
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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