Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN17322.1Conserved hypothetical protein. (248 aa)    
Predicted Functional Partners:
asmA
AsmA; Out membrane assemby protein AsmA.
 
    0.833
ACN17324.1
Hypothetical protein.
 
     0.775
cmk3
Cmk3; Cytidine monophosphate kinase Cmk.
       0.655
ACN17321.1
Hypothetical protein.
       0.655
ompA3
OmpA3; Predicted outer membrane protein OmpA.
  
    0.486
crcB
CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.
       0.472
ACN17318.1
Hypothetical protein.
       0.438
ACN17607.1
Conserved hypothetical protein.
  
     0.435
ACN14501.1
Aminotransferase family protein.
  
    0.409
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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