STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17357.1Conserved hypothetical protein. (316 aa)    
Predicted Functional Partners:
ACN17018.1
DNA deoxyribo-dipyrimidine photolyase family protein.
 
  
 0.931
ACN17356.1
Conserved hypothetical protein.
       0.552
ACN16187.1
Putative tRNA, (5-methylaminomethyl-2-thiouridylate)-methyltransferase.
 
     0.489
ppsA8
PpsA8; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase PpsA8 (PEP synthase).
       0.473
trxB
TrxB; Thioredoxin reductase (TRXR).
   
   0.444
ACN17910.1
Cation-efflux family protein.
     
 0.438
ACN17140.1
NAD-dependent epimerase/dehydratase family protein.
  
    0.432
kdkA
KdkA; 3-deoxy-D-manno-octulosonic acid kinase KdkA (KDO kinase).
  
    0.416
ACN13750.1
Hypothetical protein.
  
    0.404
ACN15672.1
Putative WD-40 repeat protein.
   
    0.400
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.