STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copACopA; Copper-transporting P-type ATPase CopA. (826 aa)    
Predicted Functional Partners:
silP
SilP; Predicted cation-transporting P-type ATPase SilP.
 
 
0.934
zntA
ZntA; Heavy metal translocating P-type ATPase ZntA.
 
 
0.888
ACN15158.1
Hypothetical protein.
  
 
 0.852
ACN17186.1
Putative cation-transporting p-type ATPase C.
  
 
 0.770
msrAB
MsrAB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
  
 0.676
trkA3
TrkA3; Na+/H+ antiporter (TrkA-N:TrkA-C).
  
  
 0.618
ACN14804.1
HTH-type transcriptional regulator (ArsR family protein).
  
  
 0.594
ACN15526.1
Transcriptional regulator (ArsR-family protein).
  
  
 0.594
ACN17580.1
Bacterial regulatory protein, ArsR family.
  
  
 0.594
ACN17871.1
Transcriptional regulator ArsR family.
  
  
 0.594
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.