STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17395.14Fe-4S iron-sulfur binding protein (ferredoxin). (273 aa)    
Predicted Functional Partners:
porA4
PorA4; Pyruvate:ferredoxin oxidoreductase, subunit PorA4.
  
  
 0.838
trmD
TrmD; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
      0.805
ACN17394.1
Dehydrogenase.
     
 0.666
ACN13216.1
FAD-dependent pyridine nucleotide oxidoreductase (FPNCR family protein).
  
 
 0.634
ACN13240.1
FAD-dependent pyridine nucleotide oxidoreductase (FPNCR family protein).
  
 
 0.634
aprA
AprA; Adenylylsulfate reductase, subunit AprA.
  
 
 0.634
ACN14599.1
FAD-dependent pyridine nucleotide oxidoreductase (FPNCR family protein).
  
 
 0.634
sdhA
SdhA; Succinate dehydrogenase/fumarate reductase, flavoprotein containing subunit SdhA.
  
 
 0.634
ACN16492.1
Putative succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
  
 
 0.634
porA2
PorA2; Pyruvate:ferredoxin oxidoreductase, subunit PorA2.
  
  
 0.634
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.