Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACN17395.14Fe-4S iron-sulfur binding protein (ferredoxin). (273 aa)    
Predicted Functional Partners:
trmD
TrmD; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
      0.804
porA4
PorA4; Pyruvate:ferredoxin oxidoreductase, subunit PorA4.
  
  
 0.794
ACN17394.1
Dehydrogenase.
     
 0.660
mop1
Mop1; Aldehyde oxidoreductase Mop.
 
  
 0.616
mop2
Mop2; Aldehyde oxidoreductase Mop.
 
  
 0.600
soxA1
SoxA1; Sarcosine oxidase, subunit alpha.
  
  
 0.576
porA2
PorA2; Pyruvate:ferredoxin oxidoreductase, subunit PorA2.
  
  
 0.557
porA3
PorA3; Pyruvate:ferredoxin oxidoreductase, subunit PorA3.
  
  
 0.557
nifH1
NifH1; Nitrogen fixation-related protein NifH (4Fe-4S cluster binding protein); Belongs to the NifH/BchL/ChlL family.
  
  
 0.553
hydA1
HydA1; Fe-only fusion hydrogenase HydA1 (fusion protein consisting of small subunit HydA, large subunit HydB and 4Fe-4S domain).
  
 
 0.547
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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