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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdh2Cdh2; Carbon-monoxide dehydrogenase Cdh2 (CODH2). (626 aa)    
Predicted Functional Partners:
cdhC
CdhC; Bifunctional acetyl-CoA synthetase/carbon monoxide dehydrogenase, beta subunit CdhC.
 
 
 0.995
cdhD
CdhD; Bifunctional acetyl-CoA synthetase/carbon monoxide dehydrogenase, delta subunit CdhD.
  
 0.980
cdhE
CdhE; Bifunctional acetyl-CoA synthetase/carbon monoxide dehydrogenase, gamma subunit CdhE.
 
  
 0.979
ACN17399.1
4Fe-4S iron-sulfur binding protein (ferredoxin).
 
  
 0.973
cooC
CooC; Carbon monoxide dehydrogenase nickel-insertion accessory protein CooC.
 
   
 0.961
ACN17669.1
Putative formylmethanofuran dehydrogenase, subunit E.
  
  
 0.955
ACN13468.1
Formylmethanofuran dehydrogenase/molybdopterin biosynthesis fusion protein.
  
 
 0.926
gltD1
GltD1; NADPH-dependent pyridine nucleotide-disulphide oxidoreductase, beta chain.
    
 0.914
cdh1
Cdh1; Carbon-monoxide dehydrogenase Cdh1 (CODH1).
  
  
0.911
fdhA3
FdhA3; NADH-dependent, cytoplasmic formate dehydrogenase, alpha chain FdhA3 (selenocysteine protein); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.910
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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