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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltJ2GltJ2; Glutamate/aspartate transport system permease protein GltJ. (240 aa)    
Predicted Functional Partners:
gltL2
GltL2; Glutamate/aspartate transport ATP-binding protein GltL.
 0.996
gltK2
GltK2; Glutamate/aspartate transport system permease protein GltK.
 
 
0.991
gltI
GltI; Glutamate/aspartate periplasmic-binding protein [Precursor] GltI.
 0.984
gltL1
GltL1; Glutamate/aspartate transport system, ATP-binding protein GltL.
 0.973
gltJ1
GltJ1; Glutamate/aspartate transport system, permease protein GltJ.
  
  
 
0.905
gltK1
GltK1; Glutamate/aspartate transport system, permease protein GltK.
 
 
 
0.883
glnQ3
GlnQ3; Glutamine transport system, ATP-binding protein GlnQ3.
 
 0.866
glnQ4
GlnQ4; Glutamine transport system, ATP-binding protein GlnQ4.
 
 0.860
glnQ5
GlnQ5; Glutamine transport system, ATP-binding protein GlnQ5.
 
 0.860
glnQ2
GlnQ2; Glutamine transport system, ATP-binding protein GlnQ2.
 
 0.858
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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