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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17452.1Putative Kef-type K+ transport system, membrane component; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (532 aa)    
Predicted Functional Partners:
trkB
TrkB; Potassium uptake system, membrane component TrkB (Trk family protein).
  
 
 0.608
rsmB
RsmB; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.608
trkH
TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.
  
 
 0.608
trkA3
TrkA3; Na+/H+ antiporter (TrkA-N:TrkA-C).
   
 
 0.586
ACN17403.1
Putative Di- and tricarboxylate transporter.
  
  
 0.528
moaE
MoaE; Molybdopterin converting factor, large subunit MoaE.
  
    0.509
hemD
HemD; Porphyrin biosynthesis protein HemD [includes: uroporphyrin-III C-methyltransferase; uroporphyrinogen-III synthase].
  
    0.478
ACN17451.1
Hypothetical protein.
       0.477
flgF
FlgF; Flagellar basal-body rod protein FlgF.
    
   0.438
ACN17449.1
Conserved hypothetical protein.
 
     0.416
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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