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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutHHutH; Histidine ammonia-lyase HutH; Belongs to the PAL/histidase family. (514 aa)    
Predicted Functional Partners:
hutU1
HutU1; Urocanate hydratase HutU1 (Urocanase) (Imidazolonepropionate hydrolase).
 
 0.997
hutU2
HutU2; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 0.997
hutI
HutI; Imidazolonepropionase HutI.
 
  
 0.986
hisD2
HisD2; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
 0.921
hutC
HutC; Histidine utilization repressor HutC.
 
  
 0.892
ftcD2
FtcD2; Formimidoyltransferase-cyclodeaminase FtcD.
 
  
 0.842
ftcD1
FtcD1; Formimidoyltransferase-cyclodeaminase FtcD.
 
  
 0.815
mttB8
MttB8; Trimethylamine methyltransferase MttB (TMA methyltransferase).
       0.762
speB
SpeB; Agmatinase SpeB (agmatine ureohydrolase) (AUH); Belongs to the arginase family.
  
  
 0.676
ACN17467.1
Predicted by Glimmer/Critica.
       0.664
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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