STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17505.1Hypothetical protein. (432 aa)    
Predicted Functional Partners:
ACN17506.1
Putative DNA-binding protein.
 
 
 0.961
ACN16002.1
Conserved hypothetical protein.
 
 
 0.812
ACN13286.1
HTH-type transcriptional regulatory protein.
 
 
 0.771
ACN16004.1
Conserved hypothetical protein.
  
     0.740
ACN17060.1
Lambda repressor-like DNA-binding family protein.
 
     0.641
hipA
HipA; Transcriptional regulator HipA.
 
   
 0.627
ACN15611.1
Putative transcriptional regulator.
 
 
 0.607
ACN17941.1
Putative transcriptional regulator.
 
 
 0.500
ACN17504.1
Conserved hypothetical protein.
       0.464
ACN17507.1
Tranposase.
       0.445
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.