STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17534.1Transposase family protein. (210 aa)    
Predicted Functional Partners:
ACN17533.1
Transposase family protein.
     0.994
ACN17535.1
Integrase family protein.
 
     0.940
xerD1
XerD1; Site-specific tyrosine recombinase XerD1 (DNA breaking-rejoining enzyme); Belongs to the 'phage' integrase family.
 
     0.776
xerD2
XerD2; Site-specific tyrosine recombinase XerD2 (DNA breaking-rejoining enzyme).
 
     0.776
xerD3
XerD3; Site-specific tyrosine recombinase XerD3 (DNA breaking-rejoining enzyme).
 
     0.776
xerD4
XerD4; Site-specific tyrosine recombinase XerD4 (DNA breaking-rejoining enzyme).
 
     0.776
ACN15636.1
Transposase (IS801 family protein).
  
     0.774
ACN17201.1
Transposase (IS1294 family protein).
  
     0.774
ACN17536.1
Integrase family protein.
       0.580
ACN15729.1
Predicted phage-specific integrase.
 
     0.507
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.