STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdpPdp; Phosphoenolpyruvate (PEP)-dependent phosphotransferase Pdp (PTS system protein); Belongs to the PEP-utilizing enzyme family. (757 aa)    
Predicted Functional Partners:
mtp
Mtp; Multiphosphoryl transfer protein Mtp (PTS system, EIIA, EIIB, EIII-Fru transfer domains).
 
 
0.911
ptsH
PtsH; Phosphocarrier protein PtsH (HPr; Histidine-containing protein).
 
 
 0.844
pfkB1
PfkB1; Carbohydrate kinase family protein PfkB1; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.839
ptsN2
PtsN2; Fructose-specific phosphotransferase system protein PtsN2 (PTS system EIIA).
 
   
 0.775
ACN17551.1
Putative Acetyl-CoA synthetase.
       0.773
ptsN1
PtsN1; Fructose-specific phosphotransferase system protein PtsN1 (PTS system EIIA).
 
   
 0.757
ACN16020.1
Hypothetical protein.
  
 
 0.748
manX
ManX; Phosphotransferase system (PTS), fructose-specific phosphotransferase component ManX (EIIAB).
 
  
 0.550
ACN13201.1
Signal transduction family protein (GGDEF domain protein).
  
  
 0.527
ACN13981.1
HTH-type transcriptional repressor (LacI family protein).
 
 
 
 0.483
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.