STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmcA2TmcA2; Acidic type II cytochrome TmcA2 (TpII-c3). (134 aa)    
Predicted Functional Partners:
tmcB2
TmcB2; Cytoplasmic Fe-S oxidoreductase (4Fe-4S ferredoxin).
 
   
 0.924
tmcC2
TmcC2; Membrane-bound heme containing protein TmcC2.
 
    0.886
ACN16274.1
Predicted polyketide synthase.
  
 
 0.836
htpG
HtpG; Molecular chaperone. Has ATPase activity.
  
 0.827
tmcA1
TmcA1; Acidic type II cytochrome TmcA1 (TpII-c3).
  
     0.749
rplQ
RplQ; 50S ribosomal protein L17.
  
   0.737
dnaK1
DnaK1; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.734
ACN15200.1
Conserved hypothetical protein.
  
 0.734
dnaK2
DnaK2; Chaperone hsp70 family protein DnaK.
  
 0.734
dnaK3
DnaK3; Chaperone heat-shock protein DnaK.
  
 0.734
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.