STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmcC2TmcC2; Membrane-bound heme containing protein TmcC2. (227 aa)    
Predicted Functional Partners:
tmcB2
TmcB2; Cytoplasmic Fe-S oxidoreductase (4Fe-4S ferredoxin).
 
   
 0.943
narG
NarG; Respiratory nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.926
tmcA2
TmcA2; Acidic type II cytochrome TmcA2 (TpII-c3).
 
    0.886
narH
NarH; Nitrate reductase, beta subunit.
  
 
 0.851
tmcB1
TmcB1; Cytoplasmic Fe-S oxidoreductase (4Fe-4S ferredoxin).
 
 
 0.804
ACN15672.1
Putative WD-40 repeat protein.
 
     0.777
tmcA1
TmcA1; Acidic type II cytochrome TmcA1 (TpII-c3).
  
    0.754
narJ
NarJ; Nitrate reductase, delta subunit.
  
  
 0.743
ACN17553.1
Putative zinc-finger protein.
       0.657
ACN13777.1
Hypothetical protein.
  
     0.622
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.