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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17561.1Conserved hypothetical protein. (799 aa)    
Predicted Functional Partners:
fucA
FucA; L-fuculose phosphate aldolase.
   
  
 0.823
ACN17560.1
Phosphatidylserine decarboxylase; Belongs to the phosphatidylserine decarboxylase family.
       0.759
ACN17559.1
Conserved hypothetical protein.
       0.757
pcb
Pcb; Pyruvate carboxylase Pcb (Pyruvic carboxylase) (PCB).
  
  
 0.610
fumA
FumA; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.548
mcmL
McmL; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
  
 0.521
sbm
Sbm; Homodimeric methylmalonyl-CoA mutase Sbm (MCM-alpha).
  
  
 0.487
mae
Mae; NAD/NADP-dependent malate dehydrogenase (malic enzyme) (NAD-ME).
  
  
 0.451
porA4
PorA4; Pyruvate:ferredoxin oxidoreductase, subunit PorA4.
     
 0.411
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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