STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
barABarA; Signal transduction histidine kinase BarA. (941 aa)    
Predicted Functional Partners:
ACN13372.1
Putative two-component response regulator receiver protein (phosphoserine phosphatase).
 
0.986
ACN17380.1
GGDEF domain family protein.
 
0.982
ACN17411.1
Putative two-component system sensor protein.
 
 
0.975
ACN16301.1
Diguanylate cyclase (GGDEF) domain protein.
 
0.970
ACN15670.1
Two-component response receiver and regulator protein.
 
0.968
ACN15189.1
Signal transduction family protein (GGDEF domain protein).
 
 0.958
ACN15540.1
Two-component hybrid protein, sensory box hisitidine kinase/adenylate cyclase.
  
 
 0.955
ACN14535.1
FAD/NADPH dehydrogenase/oxidoreductase family protein (4Fe-4S ferredoxin).
 
0.949
ACN14990.1
Two-component hybrid sensor and response regulator histidine kinase.
 
 
0.949
ACN17000.1
Two-component sensory box histidine kinase/response regulator.
 
0.949
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.