STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG9FabG9; 3-oxoacyl (acyl-carrier protein) reductase FabG9; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (255 aa)    
Predicted Functional Partners:
ACN16274.1
Predicted polyketide synthase.
  
 
 0.952
acd14
Acd14; Short-chain specific acyl-CoA dehydrogenase/oxidase Acd14 (butyryl-CoA dehydrogenase).
  
 0.809
ACN16399.1
Putative amino-acid acetyltransferase.
  
 
 0.734
atoB5
AtoB5; acetyl-CoA acetyltransferase AtoB5 (Acetoacetyl-CoA thiolase); Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.725
ACN15446.1
Putative multi-domain beta-ketoacyl polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.724
alkK2
AlkK2; Medium-chain-fatty-acid--CoA ligase (Medium-chain acyl-CoA synthetase) AlkK.
 
 
 0.642
ACN17816.1
3-oxoacyl-[acyl-carrier-protein] reductase (3-ketoacyl-acyl carrier protein reductase).
 
     0.631
ACN17584.1
Conserved hypothetical protein.
     
 0.598
pfkB1
PfkB1; Carbohydrate kinase family protein PfkB1; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.562
alkK1
AlkK1; Medium-chain-fatty-acid--CoA ligase (Medium-chain acyl-CoA synthetase) AlkK.
  
 
 0.552
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.