STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alkK2AlkK2; Medium-chain-fatty-acid--CoA ligase (Medium-chain acyl-CoA synthetase) AlkK. (249 aa)    
Predicted Functional Partners:
alkK1
AlkK1; Medium-chain-fatty-acid--CoA ligase (Medium-chain acyl-CoA synthetase) AlkK.
     0.994
ACN16274.1
Predicted polyketide synthase.
  
 0.887
pldB
PldB; Lysophopholipase PldB (alpha/beta hydrolase family protein).
    
 0.806
atoB5
AtoB5; acetyl-CoA acetyltransferase AtoB5 (Acetoacetyl-CoA thiolase); Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.806
ACN15958.1
Two-component sensory box histidine kinase/response regulator protein.
 
 
 0.763
fadD7
FadD7; long-chain-fatty-acid--CoA ligase FadD7 (Acetyl-CoA-synthetase) (Acyl-activating enzyme).
  
  
  0.729
fadD6
FadD6; long-chain-fatty-acid--CoA ligase FadD6 (Acetyl-CoA-synthetase) (Acyl-activating enzyme).
  
  
  0.723
fadD8
FadD8; long-chain-fatty-acid--CoA ligase FadD8 (Acetyl-CoA-synthetase) (Acyl-activating enzyme).
  
  
  0.718
fadD3
FadD3; long-chain-fatty-acid--CoA ligase FadD3 (Acetyl-CoA-synthetase) (Acyl-activating enzyme).
  
  
  0.713
ACN17584.1
Conserved hypothetical protein.
  
  
 0.677
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.