STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17628.1Putative outer membrane protein. (350 aa)    
Predicted Functional Partners:
aglW
AglW; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.650
ACN16754.1
Putative flagellar hook-associated protein.
  
  
 0.642
ACN16792.1
TPR repeat family protein.
 
  
 0.597
motB1
MotB1; Flagellar motor protein MotB (PomB homolog).
  
 
 0.595
ACN17626.1
Putative chemotaxis protein.
 
 
0.588
flgE
FlgE; Flagellar hook protein FlgE.
  
 
 0.552
ACN16753.1
Putative flagellin.
  
  
 0.538
ACN15340.1
Outer membrane protein (putative Skp protein).
  
 
 0.526
motB2
MotB2; Chemotaxis protein motB (Motility protein B).
  
 
 0.524
ACN17168.1
FMN-dependent dehydrogenase family protein (TIM barrel family protein).
  
     0.497
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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