STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17636.1Probable aspartokinase (Aspartate kinase); Belongs to the aspartokinase family. (454 aa)    
Predicted Functional Partners:
asd
Asd; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
 
 0.980
metX
MetX; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.
   
 0.971
dapA
DapA; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
 
 
 0.968
hom
Homoserine dehydrogenase Hom.
 
 0.965
lysA4
LysA4; Diaminopimelate decarboxylase LysA (DAP decarboxylase).
   
 0.930
ACN17643.1
Putative ferredoxin.
    
  0.920
lysC
LysC; Aspartokinase LysC (aspartate kinase); Belongs to the aspartokinase family.
  
  
 
0.913
ACN14464.1
Phosphoserine phosphatase.
    
 0.912
ACN15870.1
Conserved hypothetical protein.
    
  0.907
asnB
AsnB; Glutamine-hydrolyzing asparagine synthetase AsnB.
  
 
 0.881
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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