STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17670.1Putative lipoprotein. (410 aa)    
Predicted Functional Partners:
ACN17669.1
Putative formylmethanofuran dehydrogenase, subunit E.
       0.639
ACN17207.1
Peptidase M28B family protein.
 
   
 0.506
ACN17671.1
Hypothetical protein.
       0.487
mltD2
MltD2; Membrane-bound lytic murein transglycosylase MltD [Precursor].
  
  
 0.476
ompA1
OmpA1.
 
 
 0.459
ompA2
OmpA2; Outer membrane protein OmpA [precursor].
 
 
 0.453
ACN16766.1
Hypothetical protein.
  
   0.442
fliL
FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
   0.442
mtgA
MtgA; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
 
   
 0.408
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.