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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17700.1Amino acid-binding periplasmic amino acid binding protein; Belongs to the bacterial solute-binding protein 3 family. (332 aa)    
Predicted Functional Partners:
ACN17698.1
ABC-type branched-chain amino acid transport-system, permease component.
 
 0.996
aapP2
AapP2; General L-amino acid transport ATP-binding protein AapP.
 
 0.993
ACN17699.1
ABC-type branched-chain amino acid transport-system, permease component.
 
 
 0.990
aapM
AapM; Glutamate/glutamine/aspartate/asparagine transport system, permease protein AapM.
 
 0.965
aapP1
AapP1; Glutamate/glutamine/aspartate/asparagine transport system, ATP-binding component AapP.
 
 0.961
aapQ
AapQ; Glutamate/glutamine/aspartate/asparagine transport system, permease protein AapQ.
 
 
 0.959
aapJ2
AapJ2.
  
  
 
0.903
ACN17696.1
Putative integral membrane protein.
 
     0.732
glnQ3
GlnQ3; Glutamine transport system, ATP-binding protein GlnQ3.
 
 
 0.474
gltL1
GltL1; Glutamate/aspartate transport system, ATP-binding protein GltL.
 
 
 0.461
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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