STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17720.1TRAP-type C4-dicarboxylate transport system periplasmic component. (327 aa)    
Predicted Functional Partners:
ACN17722.1
Putative TRAP C4-dicarboxylate transport system permease DctM subunit.
 
  
 0.954
ACN17721.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.951
dctP1
DctP1; TRAP-type C4-dicarboxylate transporter, periplasmatic component DctP1.
  
     0.695
dctQ9
DctQ9; TRAP-type C4-dicarboxylate permease, small subunit DctQ9.
 
  
 0.661
dctM4
DctM4; TRAP-type C4-dicarboxylate permease, large subunit DctM4.
 
  
 0.658
dctM3
DctM3; TRAP-type C4-dicarboxylate permease, large subunit DctM3.
 
  
 0.654
mutY
MutY; A/G-specific adenine glycosylase MutY.
       0.651
dctM9
DctM9; TRAP-type C4-dicarboxylate permease, large subunit DctM9.
 
  
 0.646
dctM10
DctM10; TRAP-type C4-dicarboxylate permease, large subunit DctM10.
 
  
 0.640
ACN16571.1
TRAP-type C4-dicarboxylate transport system, large permease component.
 
  
 0.622
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.