STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hdrD5HdrD5; Heterodisulfide reductase, subunit HdrD5 (HdrCB homologue protein). (398 aa)    
Predicted Functional Partners:
hdrD3
HdrD3; Heterodisulfide reductase, subunit HdrD3 (HdrCB homologue protein).
 
 
0.673
ACN17752.1
FAD-linked oxidase family protein (FAD-binding/FAD-oxidase domain protein).
 
  
 0.659
ACN14511.1
Conserved hypothetical protein.
 
 
 0.581
glcD2
GlcD2; FAD-linked glycolate oxidase subunit GlcD.
 
  
 0.564
glcD1
GlcD1; FAD/FMN-containing glycolate oxidase, subunit GlcD.
 
  
 0.556
ACN15920.1
Conserved hypothetical protein.
 
 
 0.556
ACN14510.1
Iron-sulfur cluster-binding protein (ferredoxin family protein).
 
 
 0.540
ACN17753.1
Putative membrane protein.
       0.491
etfB2
EtfB2; Electron transfer flavoprotein, beta-subunit EftB2 (beta-ETF) (ETFSS).
  
 0.490
fdhB5
FdhB5; Formate dehydrogenase, beta chain FdhB5 (4Fe-4S family protein).
  
 
 0.475
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.