STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17765.1Cytochrome c, class III family protein. (142 aa)    
Predicted Functional Partners:
ACN16274.1
Predicted polyketide synthase.
  
 
 0.836
htpG
HtpG; Molecular chaperone. Has ATPase activity.
  
 0.827
hydA2
HydA2; Fe-only fusion hydrogenase HydA2 (fusion protein consisting of small subunit HydA, large subunit HydB and 4Fe-4S domain).
    
   0.803
rplQ
RplQ; 50S ribosomal protein L17.
  
   0.737
dnaK1
DnaK1; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.734
ACN15200.1
Conserved hypothetical protein.
  
 0.734
dnaK2
DnaK2; Chaperone hsp70 family protein DnaK.
  
 0.734
dnaK3
DnaK3; Chaperone heat-shock protein DnaK.
  
 0.734
dnaK4
DnaK4; Chaperone heat-shock protein DnaK; Belongs to the heat shock protein 70 family.
  
 0.734
rplM
RplM; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
 
 0.732
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.