STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acd15Acd15; acyl-CoA dehydrogenase Acd15. (568 aa)    
Predicted Functional Partners:
caiD2
CaiD2; enoyl-CoA hydratase / isomerase protein CaiD; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.956
fadA
FadA; 3-ketoacyl-CoA thiolase FadA (Acetyl-CoA acyltransferase); Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.941
ACN13423.1
acyl-CoA dehydrogenase (ACAD) / acyl-CoA oxidase-like protein.
  
  
  0.927
mmc
Mmc; Methylmalonyl-CoA carboxylase (12S subunit).
  
 
 0.922
acd13
Acd13; Short-chain specific acyl-CoA dehydrogenase/oxidase Acd13 (butyryl-CoA dehydrogenase).
  
  
  0.915
acd7
Acd7; acyl-CoA dehydrogenase Acd7.
  
  
 
0.906
acd9
Acd9; acyl-CoA dehydrogenase Acd9.
  
  
 
0.903
fadB
FadB; 3-hydroxyacyl-CoA dehydrogenase FadB.
  
 0.803
atoB1
AtoB1; acetyl-CoA acetyltransferase AtoB1; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.796
atoB2
AtoB2; acetyl-CoA acetyltransferase AtoB2; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.796
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.