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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17834.1Conserved hypothetical protein. (186 aa)    
Predicted Functional Partners:
prfB
PrfB; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
  
    0.824
pfp
Pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase Pfb.
 
 
 0.664
lnt
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
       0.570
ACN17837.1
Hypothetical protein.
       0.488
ACN13990.1
GGDEF domain protein (selenocysteine protein).
  
     0.479
ACN15564.1
Two-component fusion protein (glucose-1-phosphate adenylyltransferase/aminoglycoside phosphotransferase).
  
     0.479
ACN15388.1
4Fe-4S ferredoxin, iron-sulfur cluster binding protein.
  
    0.476
glgB2
GlgB2; 1,4-alpha-glucan branching enzyme GlgB (Starch branching enzyme IIB).
  
     0.460
ACN16353.1
NAD(P)H-dependent dehydrogenase/reductase.
 
     0.444
ACN16803.1
Putative metal-dependent hydrolase of the beta-lactamase superfamily.
  
     0.435
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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