STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fadBFadB; 3-hydroxyacyl-CoA dehydrogenase FadB. (802 aa)    
Predicted Functional Partners:
fadA
FadA; 3-ketoacyl-CoA thiolase FadA (Acetyl-CoA acyltransferase); Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.999
atoB1
AtoB1; acetyl-CoA acetyltransferase AtoB1; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.998
atoB2
AtoB2; acetyl-CoA acetyltransferase AtoB2; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.998
atoB3
AtoB3; acetyl-CoA acetyltransferase AtoB3 (acetoacetyl-CoA thiolase); Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.998
atoB5
AtoB5; acetyl-CoA acetyltransferase AtoB5 (Acetoacetyl-CoA thiolase); Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.997
atoB4
AtoB4; acetyl-CoA acetyltransferase AtoB4 (Acetoacetyl-CoA thiolase); Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.980
ACN16274.1
Predicted polyketide synthase.
  
 0.968
aac
Aac; acetoacetyl-CoA synthetase (AMP-binding protein).
  
 0.962
crtA2
CrtA2; 3-hydroxybutyryl-CoA dehydratase CrtA (Crotonase); Belongs to the enoyl-CoA hydratase/isomerase family.
 
0.927
caiD1
CaiD1; enoyl-CoA hydratase/carnithine racemase CaiD.
  
 0.927
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.