STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17897.1Outer membrane protein. (499 aa)    
Predicted Functional Partners:
ACN14691.1
RND efflux pump (AcrB/AcrD/AcrF family protein).
 
 0.913
acrB
AcrB; Cation/multidrug efflux pump, integral membrane protein AcrB (Acriflavin resistance family protein).
 
 0.886
ACN17900.1
Putative secretion protein.
  
 
 0.787
arcA
ArcA; Cation/multidrug efflux pump, periplasmic resistance protein AcrA (Acriflavine resistance protein A precursor); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.750
ACN14690.1
RND efflux transporter (HlyD family secretion protein); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.720
ACN17899.1
ABC-type transport system, ATP-binding protein.
     
 0.624
ACN17898.1
ABC-type transport system, permease component.
     
 0.598
ACN14667.1
Multidrug efflux system, efflux pump.
  
 
 0.527
ACN13360.1
Putative membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.515
ACN15217.1
Hypothetical protein.
  
 
 0.514
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.