STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17899.1ABC-type transport system, ATP-binding protein. (914 aa)    
Predicted Functional Partners:
ACN17900.1
Putative secretion protein.
  
 0.963
ACN17898.1
ABC-type transport system, permease component.
 
 
0.941
ACN16339.1
Predicted ABC-type transport system, membrane protein.
  
 
 0.849
ACN17706.1
Conserved hypothetical protein.
  
 
 0.753
ACN14667.1
Multidrug efflux system, efflux pump.
  
 0.715
ACN14670.1
ABC-type transporter, permease component.
 
 
0.690
ACN16274.1
Predicted polyketide synthase.
  
 
 0.685
ACN14669.1
ABC-type transporter, permease component.
 
 
0.684
ACN15084.1
Hypothetical protein.
  
  
 0.651
ACN14008.1
Conserved hypothetical protein.
  
  
 0.634
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.