STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acd16Acd16; Short-chain specific acyl-CoA dehydrogenase/oxidase Acd16 (butyryl-CoA dehydrogenase). (376 aa)    
Predicted Functional Partners:
etfA4
EtfA4; Electron transfer flavoprotein, alpha-subunit EtfA4 (alpha-ETF) (ETFLS).
 
 0.953
etfB4
EtfB4; Electron transfer flavoprotein, beta-subunit EftB4 (beta-ETF) (ETFSS).
 
 0.946
etfA2
EtfA2; Electron transfer flavoprotein, alpha-subunit EtfA2 (alpha-ETF) (ETFLS).
 
 0.897
ACN13425.1
Putative aminoglycoside phosphotransferase.
 
 
 0.873
caiC3
CaiC3; acyl-CoA synthetase (AMP-forming)/AMP-acid ligase CaiC.
 
  
 0.859
etfA3
EtfA3; Electron transfer flavoprotein, alpha-subunit EtfA3 (alpha-ETF) (ETFLS).
 
 0.819
fadB
FadB; 3-hydroxyacyl-CoA dehydrogenase FadB.
  
 0.803
etfA1
EtfA1; Electron transfer flavoprotein, alpha-subunit EtfA1 (Electron transfer flavoprotein large subunit) (ETFLS).
 
 0.772
ACN17915.1
Putative membrane protein.
   
   0.769
crtA1
CrtA1; 3-hydroxybutyryl-CoA dehydratase Crt.
  
 0.720
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.