Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
prkCPrkC; Serine/threonine protein kinase PrkC. (491 aa)    
Predicted Functional Partners:
hsdM3
HsdM3; Type I site-specific restriction modification enzyme, methylase subunit HsdM.
 
   
 0.835
ACN17951.1
Conserved hypothetical protein.
 
     0.827
hsdS3
HsdS3; Restriction endonuclease S HsdS.
 
     0.801
ACN17950.1
Hypothetical protein.
       0.778
ACN17952.1
Hypothetical protein.
  
    0.777
ACN17954.1
Conserved hypothetical protein.
       0.776
ACN17956.1
Conserved hypothetical protein.
  
    0.775
ACN17953.1
Hypothetical protein.
       0.773
ACN17955.1
Hypothetical protein.
       0.773
ACN17959.1
Hypothetical protein.
       0.601
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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