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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdM3HsdM3; Type I site-specific restriction modification enzyme, methylase subunit HsdM. (672 aa)    
Predicted Functional Partners:
hsdS3
HsdS3; Restriction endonuclease S HsdS.
 
 
 0.993
hsdS1
HsdS1; Type I site-specific restriction-modification system, specificity subunit HsdS.
 
 
 0.973
hsdS2
HsdS2; Type I restriction-modification system, specificity protein HsdS.
 
 0.972
ACN17960.1
Hypothetical protein.
  
 
 0.936
ACN17951.1
Conserved hypothetical protein.
 
     0.933
hsdR1
HsdR1; Type I site-specific restriction-modification system, restriction subunit HsdR.
 
 
 0.927
hsdR2
HsdR2; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.912
ACN17956.1
Conserved hypothetical protein.
 
    0.859
prkC
PrkC; Serine/threonine protein kinase PrkC.
 
   
 0.835
ACN13254.1
Subunit of type I site-specific restriction enzyme R; Contains deoxyribonuclease domain.
 
 
 0.821
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.