Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACN17960.1Hypothetical protein. (422 aa)    
Predicted Functional Partners:
hsdM3
HsdM3; Type I site-specific restriction modification enzyme, methylase subunit HsdM.
  
 
 0.921
hsdM1
HsdM1; Type I site-specific restriction modification enzyme, methylase subunit HsdM.
  
 
 0.811
hsdM2
HsdM2; Type I site-specific restriction modification enzyme, methylase subunit HsdM.
  
 
 0.811
ACN17959.1
Hypothetical protein.
       0.773
ACN17950.1
Hypothetical protein.
  
    0.639
ACN17952.1
Hypothetical protein.
       0.623
ACN17954.1
Conserved hypothetical protein.
       0.623
ACN17955.1
Hypothetical protein.
       0.620
ACN17953.1
Hypothetical protein.
       0.615
ACN17951.1
Conserved hypothetical protein.
       0.613
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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