STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17974.1ABC-type transporter, ATP-binding protein. (251 aa)    
Predicted Functional Partners:
ACN17973.1
ABC-type transporter, permease protein.
 0.999
ACN17975.1
ABC-type transporter, periplasmic substrate-binding protein.
 
 0.996
ACN15296.1
ABC-type transporter involved in resistance to organic solvents, permease protein.
 0.989
ACN15539.1
ABC-type transport system involved in resitance to organic solvents, permease protein.
 
 0.989
ACN15298.1
ABC-type transporter involved in resistance to organic solvents, periplasmic binding component.
 
 0.980
oppD
OppD; Peptide ABC transporter, ATP-binding protein oppD; Belongs to the ABC transporter superfamily.
     
0.971
ACN15537.1
ABC-type transport system involved in resitance to organic solvents, periplasmic substrate-binding protein.
  
 0.958
ACN15538.1
ABC-type transport system involved in resitance to organic solvents, ATP-binding protein.
  
  
  0.937
ACN15297.1
ABC-type transporter involved in resistance to organic solvents, ATP-binding protein.
  
  
 
0.913
dppD3
DppD3; ABC-type dipeptide transport system, ATP-binding component DppD; Belongs to the ABC transporter superfamily.
 
     
0.899
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.