STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACN17978.1GGDEF domain protein. (421 aa)    
Predicted Functional Partners:
ACN17411.1
Putative two-component system sensor protein.
 
 0.933
ACN13201.1
Signal transduction family protein (GGDEF domain protein).
  
 0.896
ACN17248.1
Conserved hypothetical protein.
 
 0.865
ACN13295.1
Signal transduction family protein (GGDEF domain protein).
 
 0.848
ACN17380.1
GGDEF domain family protein.
 
 0.835
ACN14850.1
Signal transduction family protein (GGDEF domain protein).
 
 
 0.827
ACN13989.1
Two domain sensory box histidine kinase (PAS/PAC domain/GGDEF domain protein).
 
 
 0.810
ACN17003.1
GGDEF domain family protein.
 
 0.810
cheA2
CheA2; Chemotaxis protein CheA.
  
  
 0.809
ACN17381.1
Sensory box histidine kinase/response regulator.
 
  
 0.807
Your Current Organism:
Desulfobacterium autotrophicum
NCBI taxonomy Id: 177437
Other names: D. autotrophicum HRM2, Desulfobacterium autotrophicum HRM2, Desulfobacterium autotrophicum str. HRM2, Desulfobacterium autotrophicum strain HRM2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.