STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP0148Related to dipeptide ABC transporter, permease protein (DppB). (325 aa)    
Predicted Functional Partners:
DP1178
Probable oligopeptide ABC transporter, ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.992
DP0150
Probable dipeptide ABC transporter, ATP-binding protein (DppD); Belongs to the ABC transporter superfamily.
 
 0.985
DP0149
Probable dipeptide ABC transporter, permease protein (DppC).
  
 0.981
DP0151
Probable dipeptide ABC transporter, ATP-binding protein (DppF); Belongs to the ABC transporter superfamily.
 
 0.966
DP0147
Related to dipeptide ABC transporter, periplasmic binding protein (DppA).
 
 0.938
DP1207
Related to peptide ABC-transporter, permease protein.
  
 0.929
DP1177
Probable oligopeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.890
DP1208
Related to ABC transporter, ATP-binding protein.
  
 0.861
DP1176
Related to oligopeptide ABC transporter, oligopeptide-binding protein.
 
 0.860
DP1205
Related to peptide ABC-transporter, periplasmic substrate binding protein.
 
 0.851
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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