STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP0152Probable acyl CoA thioester hydrolase. (148 aa)    
Predicted Functional Partners:
DP0151
Probable dipeptide ABC transporter, ATP-binding protein (DppF); Belongs to the ABC transporter superfamily.
       0.782
DP3018
Conserved hypothetical protein.
  
     0.773
DP0149
Probable dipeptide ABC transporter, permease protein (DppC).
       0.575
DP0150
Probable dipeptide ABC transporter, ATP-binding protein (DppD); Belongs to the ABC transporter superfamily.
       0.575
DP0148
Related to dipeptide ABC transporter, permease protein (DppB).
       0.573
DP0153
Hypothetical protein.
       0.454
DP0154
Related to multidrug resistance protein K.
       0.454
DP0155
Probable multidrug resistance protein B; Belongs to the major facilitator superfamily.
       0.454
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.