STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP0269Probable Fe-S oxidoreductase. (748 aa)    
Predicted Functional Partners:
DP0267
Hypothetical protein.
 
  
 0.956
DP0265
Conserved hypothetical protein.
 
     0.955
DP0266
Unknown protein.
 
     0.955
DP0268
Unknown protein.
 
     0.955
DP0264
Related to coenzyme F390 synthetase.
 
     0.950
DP2624
Related to glutamate synthase, beta subunit.
 
 
0.949
DP0263
Conserved hypothetical protein.
 
     0.920
DP2622
Conserved hypothetical protein.
  
 
 0.917
DP0270
Probable aldehyde oxidoreductase.
 
   
 0.905
pfor
Probable pyruvate-flavodoxin oxidoreductase.
  
  
 0.874
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.