STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP0341Hypothetical protein. (126 aa)    
Predicted Functional Partners:
DP0340
Related to iron-sulfur cluster binding protein.
  
 0.936
DP0342
Conserved hypothetical protein.
 
     0.865
DP0339
Conserved hypothetical protein.
  
 0.845
DP0338
Related to two-component system response regulator.
       0.677
DP1747
Unknown protein.
  
     0.612
DP2230
Probable nitrogen fixation protein (NifU); May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.612
DP0712
Unknown protein.
  
     0.480
pfor
Probable pyruvate-flavodoxin oxidoreductase.
  
  
 0.468
DP1609
Conserved hypothetical protein, C-terminal part.
  
     0.458
nrfA
Probable catalytic subunit of cytochrome c nitrite reductase; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family.
 
     0.456
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.