STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP0372Probable cobalt-zinc-cadmium resistance protein (CzcB); Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (454 aa)    
Predicted Functional Partners:
DP0371
Probable cation efflux system protein (CzcA); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.996
DP0373
Related to outer membrane protein TolC [Precursor].
 
 
 0.971
DP1755
Unknown protein.
 
 
 0.816
DP0370
Unknown protein.
       0.773
DP0374
Unknown protein.
       0.773
DP2122
Related to multidrug-efflux transport protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.650
DP1697
Probable acriflavine resistance protein B.
 
 0.610
DP2837
Related to cobalt-zinc-cadmium resistance protein (CzcA); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.586
DP0369
Related to sigma factor SigB regulation protein (RsbU).
     
 0.553
DP1754
Probable ABC transporter.
 
 
 0.550
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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