STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP0481Probable formate dehydrogenase, chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (694 aa)    
Predicted Functional Partners:
DP0683
Probable NADP-reducing hydrogenase, 51 kDa subunit.
 
 
 0.982
DP0479
Probable Fe-center hydrogenase, large subunit.
  
 
 0.969
DP0632
Probable glutamate synthase, beta subunit.
 
 
 0.959
DP1767
Probable formate dehydrogenase, gamma subunit (cytochrome B subunit).
  
 
 0.953
DP2988
Probable formate dehydrogenase, gamma subunit.
  
 
 0.953
DP2209
Probable NADH dehydrogenase (ubiquinone) I, chain F.
 
 
 0.950
DP1042
Related to hydrogenase, component I-formate hydrogenlyase subunit 7.
 
 
 0.948
DP0893
Probable glutamate synthase, small chain.
 
 
 0.944
DP1768
Probable formate dehydrogenase, beta subunit (iron-sulfur subunit).
  
 
 0.941
DP2987
Probable formate dehydrogenase, iron-sulfur chain; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
  
 
 0.941
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.