STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP0508Probable glutamate synthase, large subunit; Belongs to the glutamate synthase family. (454 aa)    
Predicted Functional Partners:
DP0632
Probable glutamate synthase, beta subunit.
 
 0.977
DP2624
Related to glutamate synthase, beta subunit.
 
 
 0.970
DP0893
Probable glutamate synthase, small chain.
 
 
 0.969
DP0507
Unknown protein.
       0.773
DP0506
Unknown protein.
       0.705
DP0269
Probable Fe-S oxidoreductase.
  
 
 0.691
DP0326
Probable ammonium transporter.
 
   
 0.607
DP2622
Conserved hypothetical protein.
  
 
 0.572
ung
Probable uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
 
      0.525
DP1198
Related to glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.475
Your Current Organism:
Desulfotalea psychrophila
NCBI taxonomy Id: 177439
Other names: D. psychrophila LSv54, Desulfotalea psychrophila LSv54
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.